A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortis Highlands of Mesoamerica

doi:10.3897/zookeys.298.4834

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Title	A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortis Highlands of Mesoamerica
Author(s)	Josiah Townsend Melissa Medina-Flores Larry Wilson Robert Jadin James Austin
Journal	ZooKeys
ISSN	1313-2989
Volume	298
Pages	77--105
DOI	10.3897/zookeys.298.4834
ZooBank	0f1b0d4e-3705-452b-afbb-337c8156b8bb
Year	2013
Publisher	Pensoft Publishers
Citation

...

Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico.
by ES Arévalo;SK Davis;JW Jr. Sites
Systematic Biology 43 pages 387--418 (1994)
- 10.1093/sysbio/43.3.387
On some Honduranian and Guatemalan snakes with the description of a new arboreal pit viper of the genus Bothrops.
by T Barbour;A Loveridge
Bulletin of the Antivenin Institute of America 3 pages 1--3 (1929)
The biogeography of the cloud forest herpetofauna of Middle America, with special reference to the Sierra de las Minas of Guatemala. PhD thesis, Lawrence, Kansas: University of Kansas.
by JA Campbell
Distribution patterns of amphibians in Middle America.
by JA Campbell
A new long-tailed rattlesnake (Viperidae) from Guerrero, Mexico.
by JA Campbell;O Flores-Villela
Herpetologica 64 pages 246--257 (2008)
- 10.1655/07-054.1
The Venomous Reptiles of the Western Hemisphere. 2 vols. Comstock Publishing Associates, Cornell University Press, Ithaca, New York. xviii + 870 + 28 pp.
by JA Campbell;WW Lamar
A new species of arboreal pitviper from the Atlantic versant of northern Central America.
by JA Campbell;EN Smith
Revista de Biología Tropical 48 pages 1001--1013 (2000)
- 11487920
Cryptic species within the Dendrophidion complex in Middle America (Serpentes: Colubridae).
by JE Cadle
Bulletin of the Museum of Comparative Zoology 160 pages 183--240 (2012)
- 10.3099/0027-4100-160.4.183
Systematics of the Dendrophidion nuchale complex (Serpentes: Colubridae) with the description of a new species from Central America. Zootaxa 3513: 1–50.
by JE Cadle;JM Savage
Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes).
by TA Castoe;CL Parkinson
Molecular Phylogenetics and Evolution 39 pages 91--110 (2006)
- 10.1016/j.ympev.2005.12.014
Modeling nucleotide evolution at a mesoscale: the phylogeny of the Neotropical pitvipers of the Porthidium group (Viperidae: Crotalinae).
by TA Castoe;MM Sasa;CL Parkinson
Molecular Phylogenetics and Evolution 37 pages 881--898 (2005)
- 10.1016/j.ympev.2005.05.013
Comparative phylogeography of pitvipers suggests a consensus of ancient Middle American highland biogeography.
by TA Castoe;JM Daza;EN Smith;MM Sasa;U Kuch;JA Campbell;PT Chippindale;CL Parkinson
Journal of Biogeography 36 pages 88--103 (2009)
- 10.1111/j.1365-2699.2008.01991.x
Phylogeny and historical biogeography of the palm-pitvipers, genus Bothriechis: Biochemical and morphological evidence.
by BI Crother;JA Campbell;DM Hillis
Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America. Ecography 33: 343–354.
by JM Daza;TA Castoe,;CL Parkinson
A guide to the snake hemipenis: a survey of basic structure and systematic characteristics.
by HG Dowling;JM Savage
Zoologica 45 pages 17--30 (1960)
MUSCLE: multiple sequence alignment with high accuracy and high throughput.
by RC Edgar
Nucleic Acids Research 32 pages 1792--1797 (2004)
- 10.1093/nar/gkh340
New species of Ctenosaura (Squamata, Iguanidae) from southeastern Honduras.
by CR Hasbún;G Köhler
Journal of Herpetology 43 pages 192--204 (2009)
- 10.1670/08-039R1.1
A new skink fauna from Caribbean islands (Squamata, Mabuyidae, Mabuyinae).
by SB Hedges;CE Conn
Zootaxa 3288 pages 1--244 (2012)
Life Zone Ecology. Second Edition. San José, Costa Rica. 206 pp.
by LR Holdridge
IUCN Red List Categories and Criteria: Version 3.1. Second Edition. IUCN, Gland, Switzerland and Cambridge, UK, iv + 32pp.
by IUCN
The hemipenis of Trimorphodon quadruplex.
by RC Jadin;EN Smith
Herpetological Review 41 pages 157--159 (2010)
Unravelling a tangle of Mexican serpents: a systematic revision of highland pitvipers. Zoological Journal of the Linnean Society, 163: 943–958.
by RC Jadin;EN Smith;JA Campbell
- 10.1111/j.1096-3642.2011.00748.x
Cryptic diversity in disjunct populations of Middle American Montane Pitvipers: a systematic reassessment of Cerrophidion godmani.
by RC Jadin;JH Townsend;TA Castoe;JA Campbell
Zoologica Scripta 41 pages 455--470 (2012)
- 10.1111/j.1463-6409.2012.00547.x
Structural geology: from local elements to regional synthesis.
by KH James
A biogeographic analysis of the herpetofauna of northwestern nuclear Central America.
by JD Johnson
Milwaukee Public Museum Contributions in Biology and Geology 76 pages 1--66 (1989)
Evolutionary implications of hemipenial morphology in the terrestrial Australian elapid snakes.
by JS Keogh
Zoological Journal of the Linnean Society 125 pages 239--278 (1999)
- 10.1111/j.1096-3642.1999.tb00592.x
Substitution bias, weighting of DNA sequence evolution, and the phylogenetic position of Fea’s viper.
by A Knight;DP Mindell
Systematic Biology 42 pages 18--31 (1993)
- 10.1093/sysbio/42.1.18
Amphibians of Central America.
by G Köhler
Color Catalogue for Field Biologists.
by G Köhler
Overview of plate tectonic history and its unresolved tectonic problems.
by P Mann;RD Rogers;L Gahagan
The geomorphology and physiographic provinces of Central America.
by JS Marshall
- 10.1201/9780203947043.pt2
The Snakes of Honduras: Systematics, Distribution, and Conservation. Society for the Study of Amphibians and Reptiles 26: i–x, 1–714.
by JR McCranie
A new species of Tantilla of the taeniata species group (Reptilia, Squamata, Colubridae, Colubrinae) from northeastern Honduras.
by JR McCranie
Zootaxa 3037 pages 37--44 (2011b)
The herpetofauna of Parque Nacional Pico Bonito, Honduras.
by JR McCranie;FE Castañeda
Phyllomedusa 4 pages 3--16 (2005)
A third new species of snake of the genus Omoadiphas (Reptilia, Squamata, Colubridae, Dipsadinae) from Honduras.
by JR McCranie;Díaz G Cruz
Zootaxa 2690 pages 53--58 (2010)
Two new species of geckos from Honduras and resurrection of Sphaerodactylus continentalis Werner from the synonymy of Sphaerodactylus millepunctatus Hallowell (Reptilia, Squamata, Gekkonoidea, Sphaerodactylidae). Zootaxa 3492: 65–76.
by JR McCranie;SB Hedges
Description of a new species of worm salamander (Caudata, Plethodontidae, Oedipina) in the subgenus Oedopinola from the central portion of the Cordillera Nombre de Dios, Honduras.
by JR McCranie;JH Townsend
Zootaxa 2990 pages 59--68 (2011)
The Amphibians of Honduras. Society for the Study of Amphibians and Reptiles. Contributions in Herpetology 19. Ithaca, New York. i–x, 1–625.
by JR McCranie;LD Wilson
A biogeographic study of the amphibians and reptiles of Honduras. PhD Thesis, University of Southern California, Los Angeles.
by JR Meyer
Reassessment of the Paleogene position of the Chortís Block relative to southern Mexico: hierarchical ranking of data and features.
by DJ Morán-Zenteno;DJ Keppie;B Marinty;E González-Torres
Revista Mexicana de Ciencias Geológicas 26 pages 177--188 (2009)
On the snake hemipenis, with notes on Psomophis and techniques of eversion: a response to Dowling.
by CW Myers;JE Cadle
Herpetological Review 34 pages 295--302 (2003)
MrModeltest v2.2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
by JAA Nylander
The Maya-Chortís boundary: a tectonostratigraphic approach.
by F Ortega-Gutiérrez;LA Solari;C Ortega-Obregón;M Elías-Herrera;U Martens;S Morán-Icál,;M Chiquín;JD Keppie;de León R Torres;P Schaaf
International Geological Review 49 pages 996--1024 (2007)
- 10.2747/0020-6814.49.11.996
Phylogenetic relationships of the “Agkistrodon complex” based on mitochondrial DNA sequence data.
by CL Parkinson;SM Moody;JE Ahlquist
Multigene phylogenetic analysis of pitvipers, with comments on their biogeography.
by CL Parkinson;JA Campbell;P Chippindale
Tracer v1.5. Available from http://tree.bio.ed.ac.uk/software/tracer/.
by A Rambaut;AJ Drummond
Jurassic-Recent Tectonic and Stratigraphic History of the Chortís Block of Honduras and Nicaragua (Northern Central America). PhD Thesis, University of Texas at Austin.
by RD Rogers
MrBayes 3: Bayesian phylogenetic inference under mixed models.
by F Ronquist;JP Huelsenbeck
Bioinformatics 19 pages 1572--1574 (2003)
- 10.1093/bioinformatics/btg180
A new species of Sibon (Squamata: Colubridae) from the mountains of eastern Guatemala.
by SM Rovito;TJ Papenfuss;C Vásquez-Almazán
Zootaxa 3266 pages 62--68 (2012)
Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an Online Reference. Version 3.0 (23 February 2012). American Society of Ichthyologists and Herpetologists, Washington, D.C. Available from http://www.asih.org/
by MH (Ed) Sabaj-Pérez
The Amphibians and Reptiles of Costa Rica. A Herpetofauna between Two Continents, between Two Seas. Cornell University Press, Ithaca, New York. 934 pp.
by JM Savage
Preservation of avian blood and tissue samples for DNA analyses.
by G Seutin;BN White;PT Boag
Canadian Journal of Zoology 69 pages 82--90 (1991)
- 10.1139/z91-013
Guayape-Papalutla fault system: A continuous Cretaceous structure from southern México to the Chortís block? Tectonic implications.
by G Silva-Romo
Geology 36 pages 75--78 (2008)
- 10.1130/G24032A.1
A new species of jumping pitviper of the genus Atropoides (Serpentes: Viperidae: Crotalinae) from the Sierra de Botaderos and the Sierra La Muralla, Honduras.
by EN Smith;JA Ferrari-Castro
Zootaxa 1948 pages 57--68 (2008)
Serpientes de Costa Rica, Snakes of Costa Rica. Instituto Nacional de Biodiversidad, Santo Domingo de Heredia, Costa Rica. 791 pp.
by A Solórzano
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.
by A Stamatakis
Bioinformatics 22 pages 2688--2690 (2006)
- 10.1093/bioinformatics/btl446
A rapid bootstrap algorithm for the RAxML web-servers.
by A Stamatakis;P Hoover;J Rougemont
Systematic Biology 75 pages 758--771 (2008)
- 10.1080/10635150802429642
PAUP*: Phylogenetic analyses using parsimony (*and other methods), version 4.0b10. Sinauer Associates, Sunderland, Massachusetts.
by DL Swofford
Palm-pit-viper (Bothriechis) phylogeny, mtDNA, and consilience.
by TW Taggart;BI Crother;ME White
Cladistics 17 pages 355--370 (2001)
- 10.1111/j.1096-0031.2001.tb00130.x
Inventory and Conservation Assessment of the Herpetofauna of the Sierra de Omoa, Honduras, with a Review of the Geophis (Squamata: Colubridae) of Eastern Nuclear Central America. Master’s Thesis, University of Florida, Gainesville, Florida.
by JH Townsend
Morphological variation in Geophis nephodrymus (Squamata: Colubridae), with comments on the conservation of Geophis in eastern Nuclear Central America.
by JH Townsend
Herpetologica 65 pages 292--302 (2009)
- 10.1655/07-039R2.1
Integrative Taxonomy Reveals the Chortís Block of Central America as an Underestimated Hotspot of Amphibian Diversity. PhD Thesis, University of Florida, Gainesville, Florida.
by JH Townsend
A distinctive new species of moss salamander (Caudata: Plethodontidae: Nototriton) from an imperiled Honduran endemism hotspot.
by JH Townsend;JM Butler;LD Wilson;JD Austin
Zootaxa 2434 pages 1--16 (2010)
Cryptic diversity in Chortís Higland moss salamanders (Caudata: Plethodontidae: Nototriton) revealed using mtDNA barcodes and phylogenetics, with a new species from eastern Honduras.
by JH Townsend;M Medina-Flores;JL Murillo;JD Austin
Systematics and Biodiversity 9 pages 275--287 (2011)
- 10.1080/14772000.2011.611188
The Amphibians and Reptiles of Cusuco National Park, Honduras. Los Anfibios y Reptiles del Parque Nacional Cusuco, Honduras. Bibliomania!, Salt Lake City, Utah. i-xiv + 1–312 pp.
by JH Townsend;LD Wilson
Conservation of the Honduran herpetofauna: Issues and imperatives.
by JH Townsend;LD Wilson
A premontane hotspot for herpetological endemism on the windward side of Refugio de Vida Silvestre Texíguat, Honduras.
by JH Townsend;LD Wilson;M Medina-Flores;E Aguilar-Urbina;BK Atkinson;CA Cerrato-Mendoza;A Contreras-Castro;LN Gray;LA Herrera-B;IR Luque-Montes;M McKewy-Mejía;A Portillo-Avilez;AL Stubbs;JD Austin
Salamandra 48 pages 92--114 (2012)
A new species of centipede snake in the Tantilla taeniata group (Squamata: Colubridae) from premontane rainforest in Refugio de Vida Silvestre Texíguat, Honduras.
by JH Townsend;LD Wilson;M Medina-Flores; Herrera-BL
Journal of Herpetology 47 pages 191--200 (2013)
- 10.1670/11-172
Safe and legal shipment of tissue samples: does it affect DNA quality? Journal of Molluscan Studies 73: 416–418.
by ST Williams
- 10.1093/mollus/eym039
Distributional patterns of the herpetofauna of Mesoamerica, a biodiversity hotspot. In: Wilson LD, Townsend JH, Johnson JD Conservation of Mesoamerican Amphibians and Reptiles. Eagle Mountain Publishing, LC, Eagle Mountain, Utah, 30–235.
by LD Wilson;JD Johnson
El componente endémico de la herpetofauna hondureña en peligro crítico: priorización y estrategias de conservación. Revista Latinoamericana de Conservación 2 (2) -3 (1): 47–67.
by LD Wilson;IR Luque-Montes;AB Alegría;JH Townsend
Bothriechis marchi. Catalogue of American Amphibians and Reptiles 544.1–544.2.
by LD Wilson;JR McCranie
The conservation status of the herpetofauna of Honduras.
by LD Wilson;JR McCranie
Amphibian and Reptile Conservation 3 pages 6--33 (2004a)
The herpetofauna of the cloud forests of Honduras.
by LD Wilson;JR McCranie
Amphibian and Reptile Conservation 3 pages 33--48 (2004b)
The Snakes of Honduras. Second edition. Milwaukee Public Museum, Milwaukee, Wisconsin. i–x + 1–150 pp.
by LD Wilson;JR Meyer
Hemipenes of Siphlophis (Serpentes, Xenodontinae) and techniques of hemipenial preparation in snakes: a response to Dowling.
by H Zaher;ALC Prudente
Herpetological Review 34 pages 302--307 (2003)

Only known citations between publications in BioNames are listed here.

[1] Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico.
by ES Arévalo;SK Davis;JW Jr. Sites
Systematic Biology 43 pages 387--418 (1994)
10.1093/sysbio/43.3.387

[2] 10.1093/sysbio/43.3.387

[3] On some Honduranian and Guatemalan snakes with the description of a new arboreal pit viper of the genus Bothrops.
by T Barbour;A Loveridge
Bulletin of the Antivenin Institute of America 3 pages 1--3 (1929)

[4] The biogeography of the cloud forest herpetofauna of Middle America, with special reference to the Sierra de las Minas of Guatemala. PhD thesis, Lawrence, Kansas: University of Kansas.
by JA Campbell

[5] Distribution patterns of amphibians in Middle America.
by JA Campbell

[6] A new long-tailed rattlesnake (Viperidae) from Guerrero, Mexico.
by JA Campbell;O Flores-Villela
Herpetologica 64 pages 246--257 (2008)
10.1655/07-054.1

[7] 10.1655/07-054.1

[8] The Venomous Reptiles of the Western Hemisphere. 2 vols. Comstock Publishing Associates, Cornell University Press, Ithaca, New York. xviii + 870 + 28 pp.
by JA Campbell;WW Lamar

[9] A new species of arboreal pitviper from the Atlantic versant of northern Central America.
by JA Campbell;EN Smith
Revista de Biología Tropical 48 pages 1001--1013 (2000)
11487920

[10] 11487920

[11] Cryptic species within the Dendrophidion complex in Middle America (Serpentes: Colubridae).
by JE Cadle
Bulletin of the Museum of Comparative Zoology 160 pages 183--240 (2012)
10.3099/0027-4100-160.4.183

[12] 10.3099/0027-4100-160.4.183

[13] Systematics of the Dendrophidion nuchale complex (Serpentes: Colubridae) with the description of a new species from Central America. Zootaxa 3513: 1–50.
by JE Cadle;JM Savage

[14] Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes).
by TA Castoe;CL Parkinson
Molecular Phylogenetics and Evolution 39 pages 91--110 (2006)
10.1016/j.ympev.2005.12.014

[15] 10.1016/j.ympev.2005.12.014

[16] Modeling nucleotide evolution at a mesoscale: the phylogeny of the Neotropical pitvipers of the Porthidium group (Viperidae: Crotalinae).
by TA Castoe;MM Sasa;CL Parkinson
Molecular Phylogenetics and Evolution 37 pages 881--898 (2005)
10.1016/j.ympev.2005.05.013

[17] 10.1016/j.ympev.2005.05.013

[18] Comparative phylogeography of pitvipers suggests a consensus of ancient Middle American highland biogeography.
by TA Castoe;JM Daza;EN Smith;MM Sasa;U Kuch;JA Campbell;PT Chippindale;CL Parkinson
Journal of Biogeography 36 pages 88--103 (2009)
10.1111/j.1365-2699.2008.01991.x

[19] 10.1111/j.1365-2699.2008.01991.x

[20] Phylogeny and historical biogeography of the palm-pitvipers, genus Bothriechis: Biochemical and morphological evidence.
by BI Crother;JA Campbell;DM Hillis

[21] Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America. Ecography 33: 343–354.
by JM Daza;TA Castoe,;CL Parkinson

[22] A guide to the snake hemipenis: a survey of basic structure and systematic characteristics.
by HG Dowling;JM Savage
Zoologica 45 pages 17--30 (1960)

[23] MUSCLE: multiple sequence alignment with high accuracy and high throughput.
by RC Edgar
Nucleic Acids Research 32 pages 1792--1797 (2004)
10.1093/nar/gkh340

[24] 10.1093/nar/gkh340

[25] New species of Ctenosaura (Squamata, Iguanidae) from southeastern Honduras.
by CR Hasbún;G Köhler
Journal of Herpetology 43 pages 192--204 (2009)
10.1670/08-039R1.1

[26] 10.1670/08-039R1.1

[27] A new skink fauna from Caribbean islands (Squamata, Mabuyidae, Mabuyinae).
by SB Hedges;CE Conn
Zootaxa 3288 pages 1--244 (2012)

[28] Life Zone Ecology. Second Edition. San José, Costa Rica. 206 pp.
by LR Holdridge

[29] IUCN Red List Categories and Criteria: Version 3.1. Second Edition. IUCN, Gland, Switzerland and Cambridge, UK, iv + 32pp.
by IUCN

[30] The hemipenis of Trimorphodon quadruplex.
by RC Jadin;EN Smith
Herpetological Review 41 pages 157--159 (2010)

[31] Unravelling a tangle of Mexican serpents: a systematic revision of highland pitvipers. Zoological Journal of the Linnean Society, 163: 943–958.
by RC Jadin;EN Smith;JA Campbell
10.1111/j.1096-3642.2011.00748.x

[32] 10.1111/j.1096-3642.2011.00748.x

[33] Cryptic diversity in disjunct populations of Middle American Montane Pitvipers: a systematic reassessment of Cerrophidion godmani.
by RC Jadin;JH Townsend;TA Castoe;JA Campbell
Zoologica Scripta 41 pages 455--470 (2012)
10.1111/j.1463-6409.2012.00547.x

[34] 10.1111/j.1463-6409.2012.00547.x

[35] Structural geology: from local elements to regional synthesis.
by KH James

[36] A biogeographic analysis of the herpetofauna of northwestern nuclear Central America.
by JD Johnson
Milwaukee Public Museum Contributions in Biology and Geology 76 pages 1--66 (1989)

[37] Evolutionary implications of hemipenial morphology in the terrestrial Australian elapid snakes.
by JS Keogh
Zoological Journal of the Linnean Society 125 pages 239--278 (1999)
10.1111/j.1096-3642.1999.tb00592.x

[38] 10.1111/j.1096-3642.1999.tb00592.x

[39] Substitution bias, weighting of DNA sequence evolution, and the phylogenetic position of Fea’s viper.
by A Knight;DP Mindell
Systematic Biology 42 pages 18--31 (1993)
10.1093/sysbio/42.1.18

[40] 10.1093/sysbio/42.1.18

[41] Amphibians of Central America.
by G Köhler

[42] Color Catalogue for Field Biologists.
by G Köhler

[43] Overview of plate tectonic history and its unresolved tectonic problems.
by P Mann;RD Rogers;L Gahagan

[44] The geomorphology and physiographic provinces of Central America.
by JS Marshall
10.1201/9780203947043.pt2

[45] 10.1201/9780203947043.pt2

[46] The Snakes of Honduras: Systematics, Distribution, and Conservation. Society for the Study of Amphibians and Reptiles 26: i–x, 1–714.
by JR McCranie

[47] A new species of Tantilla of the taeniata species group (Reptilia, Squamata, Colubridae, Colubrinae) from northeastern Honduras.
by JR McCranie
Zootaxa 3037 pages 37--44 (2011b)

[48] The herpetofauna of Parque Nacional Pico Bonito, Honduras.
by JR McCranie;FE Castañeda
Phyllomedusa 4 pages 3--16 (2005)

[49] A third new species of snake of the genus Omoadiphas (Reptilia, Squamata, Colubridae, Dipsadinae) from Honduras.
by JR McCranie;Díaz G Cruz
Zootaxa 2690 pages 53--58 (2010)

[50] Two new species of geckos from Honduras and resurrection of Sphaerodactylus continentalis Werner from the synonymy of Sphaerodactylus millepunctatus Hallowell (Reptilia, Squamata, Gekkonoidea, Sphaerodactylidae). Zootaxa 3492: 65–76.
by JR McCranie;SB Hedges

[51] Description of a new species of worm salamander (Caudata, Plethodontidae, Oedipina) in the subgenus Oedopinola from the central portion of the Cordillera Nombre de Dios, Honduras.
by JR McCranie;JH Townsend
Zootaxa 2990 pages 59--68 (2011)

[52] The Amphibians of Honduras. Society for the Study of Amphibians and Reptiles. Contributions in Herpetology 19. Ithaca, New York. i–x, 1–625.
by JR McCranie;LD Wilson

[53] A biogeographic study of the amphibians and reptiles of Honduras. PhD Thesis, University of Southern California, Los Angeles.
by JR Meyer

[54] Reassessment of the Paleogene position of the Chortís Block relative to southern Mexico: hierarchical ranking of data and features.
by DJ Morán-Zenteno;DJ Keppie;B Marinty;E González-Torres
Revista Mexicana de Ciencias Geológicas 26 pages 177--188 (2009)

[55] On the snake hemipenis, with notes on Psomophis and techniques of eversion: a response to Dowling.
by CW Myers;JE Cadle
Herpetological Review 34 pages 295--302 (2003)

[56] MrModeltest v2.2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
by JAA Nylander

[57] The Maya-Chortís boundary: a tectonostratigraphic approach.
by F Ortega-Gutiérrez;LA Solari;C Ortega-Obregón;M Elías-Herrera;U Martens;S Morán-Icál,;M Chiquín;JD Keppie;de León R Torres;P Schaaf
International Geological Review 49 pages 996--1024 (2007)
10.2747/0020-6814.49.11.996

[58] 10.2747/0020-6814.49.11.996

[59] Phylogenetic relationships of the “Agkistrodon complex” based on mitochondrial DNA sequence data.
by CL Parkinson;SM Moody;JE Ahlquist

[60] Multigene phylogenetic analysis of pitvipers, with comments on their biogeography.
by CL Parkinson;JA Campbell;P Chippindale

[61] Tracer v1.5. Available from http://tree.bio.ed.ac.uk/software/tracer/.
by A Rambaut;AJ Drummond

[62] Jurassic-Recent Tectonic and Stratigraphic History of the Chortís Block of Honduras and Nicaragua (Northern Central America). PhD Thesis, University of Texas at Austin.
by RD Rogers

[63] MrBayes 3: Bayesian phylogenetic inference under mixed models.
by F Ronquist;JP Huelsenbeck
Bioinformatics 19 pages 1572--1574 (2003)
10.1093/bioinformatics/btg180

[64] 10.1093/bioinformatics/btg180

[65] A new species of Sibon (Squamata: Colubridae) from the mountains of eastern Guatemala.
by SM Rovito;TJ Papenfuss;C Vásquez-Almazán
Zootaxa 3266 pages 62--68 (2012)

[66] Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an Online Reference. Version 3.0 (23 February 2012). American Society of Ichthyologists and Herpetologists, Washington, D.C. Available from http://www.asih.org/
by MH (Ed) Sabaj-Pérez

[67] The Amphibians and Reptiles of Costa Rica. A Herpetofauna between Two Continents, between Two Seas. Cornell University Press, Ithaca, New York. 934 pp.
by JM Savage

[68] Preservation of avian blood and tissue samples for DNA analyses.
by G Seutin;BN White;PT Boag
Canadian Journal of Zoology 69 pages 82--90 (1991)
10.1139/z91-013

[69] 10.1139/z91-013

[70] Guayape-Papalutla fault system: A continuous Cretaceous structure from southern México to the Chortís block? Tectonic implications.
by G Silva-Romo
Geology 36 pages 75--78 (2008)
10.1130/G24032A.1

[71] 10.1130/G24032A.1

[72] A new species of jumping pitviper of the genus Atropoides (Serpentes: Viperidae: Crotalinae) from the Sierra de Botaderos and the Sierra La Muralla, Honduras.
by EN Smith;JA Ferrari-Castro
Zootaxa 1948 pages 57--68 (2008)

[73] Serpientes de Costa Rica, Snakes of Costa Rica. Instituto Nacional de Biodiversidad, Santo Domingo de Heredia, Costa Rica. 791 pp.
by A Solórzano

[74] RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.
by A Stamatakis
Bioinformatics 22 pages 2688--2690 (2006)
10.1093/bioinformatics/btl446

[75] 10.1093/bioinformatics/btl446

[76] A rapid bootstrap algorithm for the RAxML web-servers.
by A Stamatakis;P Hoover;J Rougemont
Systematic Biology 75 pages 758--771 (2008)
10.1080/10635150802429642

[77] 10.1080/10635150802429642

[78] PAUP*: Phylogenetic analyses using parsimony (*and other methods), version 4.0b10. Sinauer Associates, Sunderland, Massachusetts.
by DL Swofford

[79] Palm-pit-viper (Bothriechis) phylogeny, mtDNA, and consilience.
by TW Taggart;BI Crother;ME White
Cladistics 17 pages 355--370 (2001)
10.1111/j.1096-0031.2001.tb00130.x

[80] 10.1111/j.1096-0031.2001.tb00130.x

[81] Inventory and Conservation Assessment of the Herpetofauna of the Sierra de Omoa, Honduras, with a Review of the Geophis (Squamata: Colubridae) of Eastern Nuclear Central America. Master’s Thesis, University of Florida, Gainesville, Florida.
by JH Townsend

[82] Morphological variation in Geophis nephodrymus (Squamata: Colubridae), with comments on the conservation of Geophis in eastern Nuclear Central America.
by JH Townsend
Herpetologica 65 pages 292--302 (2009)
10.1655/07-039R2.1

[83] 10.1655/07-039R2.1

[84] Integrative Taxonomy Reveals the Chortís Block of Central America as an Underestimated Hotspot of Amphibian Diversity. PhD Thesis, University of Florida, Gainesville, Florida.
by JH Townsend

[85] A distinctive new species of moss salamander (Caudata: Plethodontidae: Nototriton) from an imperiled Honduran endemism hotspot.
by JH Townsend;JM Butler;LD Wilson;JD Austin
Zootaxa 2434 pages 1--16 (2010)

[86] Cryptic diversity in Chortís Higland moss salamanders (Caudata: Plethodontidae: Nototriton) revealed using mtDNA barcodes and phylogenetics, with a new species from eastern Honduras.
by JH Townsend;M Medina-Flores;JL Murillo;JD Austin
Systematics and Biodiversity 9 pages 275--287 (2011)
10.1080/14772000.2011.611188

[87] 10.1080/14772000.2011.611188

[88] The Amphibians and Reptiles of Cusuco National Park, Honduras. Los Anfibios y Reptiles del Parque Nacional Cusuco, Honduras. Bibliomania!, Salt Lake City, Utah. i-xiv + 1–312 pp.
by JH Townsend;LD Wilson

[89] Conservation of the Honduran herpetofauna: Issues and imperatives.
by JH Townsend;LD Wilson

[90] A premontane hotspot for herpetological endemism on the windward side of Refugio de Vida Silvestre Texíguat, Honduras.
by JH Townsend;LD Wilson;M Medina-Flores;E Aguilar-Urbina;BK Atkinson;CA Cerrato-Mendoza;A Contreras-Castro;LN Gray;LA Herrera-B;IR Luque-Montes;M McKewy-Mejía;A Portillo-Avilez;AL Stubbs;JD Austin
Salamandra 48 pages 92--114 (2012)

[91] A new species of centipede snake in the Tantilla taeniata group (Squamata: Colubridae) from premontane rainforest in Refugio de Vida Silvestre Texíguat, Honduras.
by JH Townsend;LD Wilson;M Medina-Flores; Herrera-BL
Journal of Herpetology 47 pages 191--200 (2013)
10.1670/11-172

[92] 10.1670/11-172

[93] Safe and legal shipment of tissue samples: does it affect DNA quality? Journal of Molluscan Studies 73: 416–418.
by ST Williams
10.1093/mollus/eym039

[94] 10.1093/mollus/eym039

[95] Distributional patterns of the herpetofauna of Mesoamerica, a biodiversity hotspot. In: Wilson LD, Townsend JH, Johnson JD Conservation of Mesoamerican Amphibians and Reptiles. Eagle Mountain Publishing, LC, Eagle Mountain, Utah, 30–235.
by LD Wilson;JD Johnson

[96] El componente endémico de la herpetofauna hondureña en peligro crítico: priorización y estrategias de conservación. Revista Latinoamericana de Conservación 2 (2) -3 (1): 47–67.
by LD Wilson;IR Luque-Montes;AB Alegría;JH Townsend

[97] Bothriechis marchi. Catalogue of American Amphibians and Reptiles 544.1–544.2.
by LD Wilson;JR McCranie

[98] The conservation status of the herpetofauna of Honduras.
by LD Wilson;JR McCranie
Amphibian and Reptile Conservation 3 pages 6--33 (2004a)

[99] The herpetofauna of the cloud forests of Honduras.
by LD Wilson;JR McCranie
Amphibian and Reptile Conservation 3 pages 33--48 (2004b)

[100] The Snakes of Honduras. Second edition. Milwaukee Public Museum, Milwaukee, Wisconsin. i–x + 1–150 pp.
by LD Wilson;JR Meyer

[101] Hemipenes of Siphlophis (Serpentes, Xenodontinae) and techniques of hemipenial preparation in snakes: a response to Dowling.
by H Zaher;ALC Prudente
Herpetological Review 34 pages 302--307 (2003)

Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico.

The biogeography of the cloud forest herpetofauna of Middle America, with special reference to the Sierra de las Minas of Guatemala. PhD thesis, Lawrence, Kansas: University of Kansas.

Distribution patterns of amphibians in Middle America.

The Venomous Reptiles of the Western Hemisphere. 2 vols. Comstock Publishing Associates, Cornell University Press, Ithaca, New York. xviii + 870 + 28 pp.

Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes).

Modeling nucleotide evolution at a mesoscale: the phylogeny of the Neotropical pitvipers of the Porthidium group (Viperidae: Crotalinae).

Comparative phylogeography of pitvipers suggests a consensus of ancient Middle American highland biogeography.

Phylogeny and historical biogeography of the palm-pitvipers, genus Bothriechis: Biochemical and morphological evidence.

Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America. Ecography 33: 343–354.

A guide to the snake hemipenis: a survey of basic structure and systematic characteristics.

MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Life Zone Ecology. Second Edition. San José, Costa Rica. 206 pp.

IUCN Red List Categories and Criteria: Version 3.1. Second Edition. IUCN, Gland, Switzerland and Cambridge, UK, iv + 32pp.

The hemipenis of Trimorphodon quadruplex.

Structural geology: from local elements to regional synthesis.

Evolutionary implications of hemipenial morphology in the terrestrial Australian elapid snakes.

Substitution bias, weighting of DNA sequence evolution, and the phylogenetic position of Fea’s viper.

Amphibians of Central America.

Color Catalogue for Field Biologists.

Overview of plate tectonic history and its unresolved tectonic problems.

The geomorphology and physiographic provinces of Central America.

The Snakes of Honduras: Systematics, Distribution, and Conservation. Society for the Study of Amphibians and Reptiles 26: i–x, 1–714.

The herpetofauna of Parque Nacional Pico Bonito, Honduras.

The Amphibians of Honduras. Society for the Study of Amphibians and Reptiles. Contributions in Herpetology 19. Ithaca, New York. i–x, 1–625.

A biogeographic study of the amphibians and reptiles of Honduras. PhD Thesis, University of Southern California, Los Angeles.

Reassessment of the Paleogene position of the Chortís Block relative to southern Mexico: hierarchical ranking of data and features.

On the snake hemipenis, with notes on Psomophis and techniques of eversion: a response to Dowling.

MrModeltest v2.2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.

The Maya-Chortís boundary: a tectonostratigraphic approach.

Phylogenetic relationships of the “Agkistrodon complex” based on mitochondrial DNA sequence data.

Multigene phylogenetic analysis of pitvipers, with comments on their biogeography.

Tracer v1.5. Available from http://tree.bio.ed.ac.uk/software/tracer/.

Jurassic-Recent Tectonic and Stratigraphic History of the Chortís Block of Honduras and Nicaragua (Northern Central America). PhD Thesis, University of Texas at Austin.

MrBayes 3: Bayesian phylogenetic inference under mixed models.

Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an Online Reference. Version 3.0 (23 February 2012). American Society of Ichthyologists and Herpetologists, Washington, D.C. Available from http://www.asih.org/

The Amphibians and Reptiles of Costa Rica. A Herpetofauna between Two Continents, between Two Seas. Cornell University Press, Ithaca, New York. 934 pp.

Preservation of avian blood and tissue samples for DNA analyses.

Guayape-Papalutla fault system: A continuous Cretaceous structure from southern México to the Chortís block? Tectonic implications.

Serpientes de Costa Rica, Snakes of Costa Rica. Instituto Nacional de Biodiversidad, Santo Domingo de Heredia, Costa Rica. 791 pp.

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

A rapid bootstrap algorithm for the RAxML web-servers.

PAUP*: Phylogenetic analyses using parsimony (*and other methods), version 4.0b10. Sinauer Associates, Sunderland, Massachusetts.

Palm-pit-viper (Bothriechis) phylogeny, mtDNA, and consilience.

Inventory and Conservation Assessment of the Herpetofauna of the Sierra de Omoa, Honduras, with a Review of the Geophis (Squamata: Colubridae) of Eastern Nuclear Central America. Master’s Thesis, University of Florida, Gainesville, Florida.

Morphological variation in Geophis nephodrymus (Squamata: Colubridae), with comments on the conservation of Geophis in eastern Nuclear Central America.

Integrative Taxonomy Reveals the Chortís Block of Central America as an Underestimated Hotspot of Amphibian Diversity. PhD Thesis, University of Florida, Gainesville, Florida.

The Amphibians and Reptiles of Cusuco National Park, Honduras. Los Anfibios y Reptiles del Parque Nacional Cusuco, Honduras. Bibliomania!, Salt Lake City, Utah. i-xiv + 1–312 pp.

Conservation of the Honduran herpetofauna: Issues and imperatives.

A premontane hotspot for herpetological endemism on the windward side of Refugio de Vida Silvestre Texíguat, Honduras.

Safe and legal shipment of tissue samples: does it affect DNA quality? Journal of Molluscan Studies 73: 416–418.

Distributional patterns of the herpetofauna of Mesoamerica, a biodiversity hotspot. In: Wilson LD, Townsend JH, Johnson JD Conservation of Mesoamerican Amphibians and Reptiles. Eagle Mountain Publishing, LC, Eagle Mountain, Utah, 30–235.

El componente endémico de la herpetofauna hondureña en peligro crítico: priorización y estrategias de conservación. Revista Latinoamericana de Conservación 2 (2) -3 (1): 47–67.

Bothriechis marchi. Catalogue of American Amphibians and Reptiles 544.1–544.2.

The conservation status of the herpetofauna of Honduras.

The herpetofauna of the cloud forests of Honduras.

The Snakes of Honduras. Second edition. Milwaukee Public Museum, Milwaukee, Wisconsin. i–x + 1–150 pp.

Hemipenes of Siphlophis (Serpentes, Xenodontinae) and techniques of hemipenial preparation in snakes: a response to Dowling.

A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortis Highlands of Mesoamerica

Authors

PAUP: Phylogenetic analyses using parsimony (and other methods), version 4.0b10. Sinauer Associates, Sunderland, Massachusetts.