Chironomidae Macquart, 1838
Tokunagaia ambigua Makarchenko & Makarchenko, 2007
Tokunagaia biconvexa Makarchenko & Makarchenko, 2007
Tokunagaia excellens (Brundin, 1956)
Tokunagaia fasciata Liu & Wang, 2006
Tokunagaia ikip Makarchenko & Makarchenko, 2007
Tokunagaia kamiarata Sasa & Hirabayashi, 1993
Tokunagaia kibunensis (Tokunaga, 1939)
Tokunagaia obriaini Hayes & Murray, 1987
Tokunagaia oleantoni Makarchenko & Makarchenko, 2007
Tokunagaia parexcellens Tuiskunen, 1986
Tokunagaia pseudorowensis Makarchenko & Makarchenko, 2004
Tokunagaia quadrulata Liu & Wang, 2006
Tokunagaia rectangularis (Goetghebuer, 1940)
Tokunagaia rowensis (Saether, 1969)
Tokunagaia scutellata (Brundin, 1956)
Tokunagaia spinosa Liu & Wang, 2006
Tokunagaia subulata Liu & Wang, 2006
Tokunagaia tonollii (Rossaro, 1983)
Tokunagaia unicentrata Liu & Wang, 2006
